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Ryan Molecke's Online Resume
Objective:
    New employment opportunities
Education: University of New Mexico
    B.S.E. Computer Engineering (May 2006)
    Ph.D. Nanoscience & Microsystems Engineering
       conc. in Nano-Bio Interfaces (Feb 2011)
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Research Experience:
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Advanced Logic / Electronics / Microprocessor Design, Computer Architecture and Design,
Controls and Process Engineering, Robotics, Diagnostic Systems, FPGA/CPLD's, Animation / Games / Web Design, Custom Hardware Interface Design,
Digital Signal Processing, Networks, Vacuum/Pressurized Systems,
Machining, Welding, High Power Systems, Plasma Systems, Laser Tweezers Force Measurement,
Micro/Nanoscale Characterization, MEMS, Nanofluidics, Electrochemistry, Drug-Delivery, Quantum Dots for Biomedical Applications, Biomedical Engineering,
FRAP, Multispectral Imaging, Evaporation-Induced Self-Assembly, Coarse-graining and Semi-empirical Methods, Atomic / Molecular / Mesoscale Simulation
and Modeling, Quantum Density Functional Theory, Colloid and Thin-Film Dynamics, Discrete and Finite Element Modeling,
SAXS/GISAXS, Clustering Analysis, Statistical Methods, Crystallography, Surface / Interface Physics
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Programming Experience:
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VHDL, Java, Swing, C, C++, Perl, PHP, SQL, Tcl, Tk, HTML, XML, CSS, Javascript, AJAX, jQuery, Expect, Assembly, shell scripting,
ActionScript, Lingo, R statistics engine, Matlab, Mathematica, BASIC, Labview, LAMMPS, Materials Studio, CASTEP, Crystal Ball
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Professional Experience:
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June 2009 to Feb 2011, UNM Advanced Materials Laboratory, Research Assistant
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Modeling and simulation of "soft-particle" colloids using the Large-Scale Atomic/Molecular Massively-Parallel
Simulator (LAMMPS). I implemented the classical Flory-Huggins polymer/solvent interaction potentials into LAMMPS,
and matched simulations of evaporation-induced self-assembly in a system of gold nanoparticles coated with
dodecanethiol in a toluene / PMMA solvent. I updated LAMMPS-user peripheral capabilities, including developing a tool
to simulate grazing-incidence small-angle x-ray spectroscopy (GISAXS) intensity plots, and a tool to analyse clustering
vs. randomness in 3D distributions of particles.
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June 2007 to June 2009, UNM AML / Sandia National Laboratories, Research Assistant
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In the Laser Tweezers Optical Trapping lab at Sandia National Labs (Microfluidics
Group), I investigated force interactions between micro-particles and live cells
for drug-delivery applications. I performed electrochemistry and biochemistry sample preparation for characterization
with the laser tweezers. I wrote software and hardware drivers to control the microscope stage,
high-res ccd camera, laser, and acousto-optic deflector. I helped write statistical analysis code to infer force
interactions from video files of trapped-particle interactions using artificial vision algorithms.
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August 2006 to June 2007, UNM Center for High Technology Materials, Research Assistant
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Crystallographic analysis of semiconductor nano-pillars and nano-pyramids formed via plasma-enhanced
chemical vapor deposition, atomic modeling of lattices and surface reconstructions, advanced crystal
formalism and theory. I have extended this research to model evolution of crystal shape during growth and
extrapolation of surface energies for correlation to first-principles calculations and nanoparticle toxicity studies.
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June 2005 to January 2006, Intel, Product Engineer (Intern), Handheld Sort Dept.
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Operation and programming of die-level microchip testing machines.
Industrial microchip testing and failure analysis.
Industrial manufacturing statistical analysis and graphical modelling.
Yield analysis, material dispositioning, tools programming, tech documentation.
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Aug 2004 to Present, UNM Spatio-Temporal Cell Pathology Group, Software Engineer
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I wrote a Tcl/Tk/Expect/R graphical user application that enables cancer researchers to more easily
quantify protein clustering and co-clustering on cancer cell surfaces. I updated this tool to accept 3D data
and implemented a similar tool in LAMMPS.
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2004-2006, Undergrad Design Projects UNM Electrical & Computer Engineering College, Hardware Engineer
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I designed and constructed a hardware/software system to detect and diagnose component
errors on a small robot. I built several high-voltage circuits such as Tesla coils and plasma-globe drivers.
I designed and constructed an FPGA-based automatic chess annotation machine including
magnetic chess board, LCD screen, serial communications system, mini-printer, and Java Swing graphical user interface.
I was also the ECE department webmaster in 2004/2005.
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Mar 2003 to Dec 2004, UNM Plasma Fusion Research Laboratory, Reseach Assistant
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I constructed the main (IGBT-based) pulsed power unit to supply 1 kA
current pulses for the Helcat plasma device, and an accompanying 1 F capacitor bank. This pulser still powers the
plasma chamber, seven years later. I did purchasing, built cooling, cabling, and chamber hardware, and
programmed the PIC microcontroller system.
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Awards:
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ACS/NIH 2006 Integrated Graduate Education and Research Traineeship
(IGERT) Graduate Fellowship
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I was awarded aid by the American Cancer Society and the National Institutes of Health to advance research and
understanding in the natural sciences with a focus on nanoscience. As part of this fellowship I participated in
community outreach in the forms of student tutoring and science demonstrations at local grade-schools, and attended
seminars and three research rotations.
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Background:
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I grew up in Albuquerque, NM. I did high school speech and debate and I was an elite gymnast through college.
My hobbies include playing piano, stained-glass, and electronics.
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