Study Guide
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See below for study guide questions for the final exam.

31P MRS Experience

 What are the benefits and limitations of 31P-NMR spectroscopy for studying muscle biochemistry during intense exercise?  

What is the proposed function of the creatine kinase/phosphate shuttle in contracting skeletal muscle?  

What is the source of the increasing concentration of Pi during intense exercise?  

Glycogenolysis and Glycolysis

Is phosphorylase the only enzyme needed during glycogenolysis?  If not, why?  

Explain the multifaceted biochemical regulation of glycogenolysis.  

Why is the regulation of glycogenolysis important for influencing the potential flux through glycolysis?  

Why does intramuscular free glucose increase during glycogenolysis?  

Why is lactate production important for the acute ability to continue glycolysis during intense exercise?  

Acidosis

What are the sources of protons during muscle contraction?

What are the sources of proton buffering/utilization/removal in skeletal muscle?  

Is it correct to interpret lactate production as the cause of muscle acidosis?  Why?  

Why does ATP hydrolysis release a proton?  

How would you explain the biochemistry of metabolic acidosis during exercise?  

What is the strong ion difference (from Stewart Physico-chemical approach), and how is it used to argue for the development of metabolic acidosis?  

What is a dissociation constant, and how is it different to an association constant?  

Mitochondrial Respiration

Compared to glycolysis, explain where the added sources of ATP come from during oxidative phosphorylation from glucose.  

At what stages of metabolism is CO2 produced for both fats and carbohydrates?  

Why are only two molecules of ATP generated for each FADH + H+ during the Electron Transport Chain?  

What is special about the cytosolic and mitochondrial concentrations of NAD and NADH ?  For example, if they are different, why are they different?  

Assuming all the molecules of the TCA Cycle and Electron Transport Chain are present, what substrates are needed in the mitochondria for continuation of the electron transport chain and ATP production?  

Why is electron flow along the Electron Transport Chain unidirectional?  

What does the phrase "uncoupling of oxidative phosphorylation" mean?  

Explain the process of FFA mobilization and fatty acid oxidation during low intensity exercise?  

Why is there an increased in carbohydrate catabolism during increasing exercise intensities?  

Order the following from lowest to highest reduction potential.

                                1/2 O2 ; NAD+ ; cytochrome C ; pyruvate  

                        Why did you order these molecules this way?  

What are the similarities between the hormonal activation of glycogenolysis and lipolysis?  

What are the enzyme(s) responsible for FFA mobilization?  

Compare where CO2 is produced during FFA catabolism and carbohydrate catabolism.  For a given amount of ATP production, catabolism of which substrate yields more CO2?  Why?  

It is generally recognized the more ATP per liter of oxygen is produced from CHO than FFA.  Evaluate the two pathways of catabolism and try to explain why this is so (a tough one !!!).  

There are several potential rate-limiting reactions to FFA catabolism.  Given a diagram of FFA catabolism, what and where are they, and explain why they may be rate limiting.  

What is the role of carnitine during FFA catabolism, and during exercise of increasing intensity?  

Post-exercise Protein Synthesis

Explain the differences between transcription and translation.  

What are examples of regulators of DNA transcription?  

What is the function of tRNA during protein synthesis?

Does transcription and translation always result in active/functional proteins?  What often needs to happen for a protein to be functional?  

How does exercise influence protein degradation and synthesis?  

Does amino acid availability alter post-exercise protein synthesis?  Are all amino acids and proteins equal in supporting muscle protein synthesis? Explain